Protein Coverage Summarizer

Determines the percent of the residues in proteins
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  • Publisher Name:
  • Pacific Northwest National Laboratory
  • Operating Systems:
  • Windows All
  • File Size:
  • 658 KB

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Protein Coverage Summarizer Description

Protein Coverage Summarizer is an advanced program designed to calculate the percent of residues in each protein sequence that has been identified. The program requires two input files: the first should contain the protein names and protein sequences (optionally with protein description) while the second should contain the peptide sequences and optionally also contain the protein name associated with each peptide sequence. A graphical user interface (GUI) is provided to allow the user to select the input files, set the options, and browse the coverage results. The results browser displays the protein sequences, highlighting the residues that were present in the peptide input file, and providing sequence coverage stats for each protein.


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