Peptide File Extractor Extracts peptide information from Sequest files
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Peptide File Extractor Ranking & Summary

Peptide File Extractor Tags

extractor extract peptide viewer peptide LDIF extracts automate extracts peptide fragmentation peptide sequence peptide information Peptide fragment analyzer predict peptide fragmentation analyze peptide peptide distribution peptide hit result summarize SEQUEST peptide modeller peptide extractor peptide identification SEQUEST generator SEQUEST MALDI peptide peptide statistics SEQUEST splitter proteotypic peptide peptide evaluation peptide aligner align peptide GeneSpring peptide fragments peptide analysis

Peptide File Extractor Description

Peptide File Extractor is a professional utility designed to process the Sequest .Out or _out.txt files to create tab-delimited files summarizing the peptide identifications in the .Out file. If processing .Out files, then the concatenated _Out.txt file file will also be created. In addition, the program looks for .Dta files for the given dataset and will combine them into _Dta.txt files. The program can also be used as a simple .Dta file concatenator if no .Out or _Out.txt files are present for the specified dataset but .Dta files are present. The First Hits file contains only the top scoring peptide reported for each spectrum. The Synopsis file contains all of the peptides above a threshold in each spectrum. See below for some screenshots of example input and output files

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