FBAT Family Based Association Tests
Download

FBAT Ranking & Summary

FBAT Tags

Test Tester check File Association Manage Association Create Association Association Association Manager action association jar association fix Display File Association dafault image association Display Association Association Builder create file association make file association edit program association Association Fix Association Fixer Home Owners Association Association Changer Change Association icon association association rule FileType Association association handler automate association association tracker database association rules control file association file association controler manage file association XnView association view association rules executable association haplotype association test population admixture Monte-Carlo exact test check Mendelian consistency haplotype association extension association manager genetic association analysis analyze genetic association association test

FBAT Description

FBAT is a small, handy tool specially designed to implement a broad class of Family Based Association Tests, adjusted for population admixture. Main features: Uses data from nuclear families, sibships, pedigrees, or any combination; provides unbiased tests with or without founder genotypes. Analyzes dichotomous, measured, or time-to-onset traits and multiple traits; trait definition can be optimized. Analyzes markers on the x-chromosome with same options as autosomal marker analysis Offers bi-allelic and multi-allelic tests of association using standard genetic models (additive, dominant, recessive or genotype). Offers large sample and Monte-Carlo exact tests of the null hypothesis: no linkage and no association; offers large sample test of H0: no association. Estimates allele frequencies; checks Mendelian consistency. Tests multiple markers using haplotypes; estimates haplotype frequencies and linkage disequilibrium between pairs of markers. Offers three multi-marker tests for testing multiple markers simultaneously, without resolving phase or assuming no recombination. Offers two multiple trait tests. Interactive and command driven program using standard pedigree data files; phenotype file is optional.

FBAT Related Software